org.gcube.dataanalysis.executor.generators
Class D4ScienceGenerator

java.lang.Object
  org.gcube.dataanalysis.executor.generators.D4ScienceGenerator

All Implemented Interfaces:

org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent, org.gcube.dataanalysis.ecoengine.interfaces.Generator

public class D4ScienceGenerator
extends Object
implements org.gcube.dataanalysis.ecoengine.interfaces.Generator

Field Summary

protected org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration	config
protected static String	defaultJobOutput
protected static String	defaultScriptFile
protected org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode	distributionModel
protected RemoteJobManager	jobManager
protected String	mainclass
protected static int	maxSpeciesAllowedPerJob
protected int	speciesBlocks
protected int	speciesBlocksExecuted
protected boolean	stop

Constructor Summary

D4ScienceGenerator(org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration config)

Method Summary

void	buildScriptFile(String jobName, String jobOutput, String jarsPath, String fullMainClass)
void	generate()
Object	getContent()
org.gcube.dataanalysis.ecoengine.utils.VARTYPE	getContentType()
org.gcube.dataanalysis.ecoengine.configuration.INFRASTRUCTURE	getInfrastructure()
HashMap<String,org.gcube.dataanalysis.ecoengine.utils.VarCouple>	getInputParameters()
String	getLoad()
String	getResourceLoad()
String	getResources()
float	getStatus()
org.gcube.dataanalysis.ecoengine.configuration.ALG_PROPS[]	getSupportedAlgorithms()
void	init()
void	setConfiguration(org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration config)
void	shutdown()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

config

protected org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration config

distributionModel

protected org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode distributionModel

jobManager

protected RemoteJobManager jobManager

defaultJobOutput

protected static String defaultJobOutput

defaultScriptFile

protected static String defaultScriptFile

mainclass

protected String mainclass

stop

protected boolean stop

maxSpeciesAllowedPerJob

protected static int maxSpeciesAllowedPerJob

speciesBlocksExecuted

protected int speciesBlocksExecuted

speciesBlocks

protected int speciesBlocks

Constructor Detail

D4ScienceGenerator

public D4ScienceGenerator(org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration config)

Method Detail

generate

public void generate()
              throws Exception

Specified by:

generate in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

Throws:

Exception

buildScriptFile

public void buildScriptFile(String jobName,
                            String jobOutput,
                            String jarsPath,
                            String fullMainClass)
                     throws Exception

Throws:

Exception

getInputParameters

public HashMap<String,org.gcube.dataanalysis.ecoengine.utils.VarCouple> getInputParameters()

Specified by:

getInputParameters in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getResources

public String getResources()

Specified by:

getResources in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getStatus

public float getStatus()

Specified by:

getStatus in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getContentType

public org.gcube.dataanalysis.ecoengine.utils.VARTYPE getContentType()

Specified by:

getContentType in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getContent

public Object getContent()

Specified by:

getContent in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getSupportedAlgorithms

public org.gcube.dataanalysis.ecoengine.configuration.ALG_PROPS[] getSupportedAlgorithms()

Specified by:

getSupportedAlgorithms in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

getInfrastructure

public org.gcube.dataanalysis.ecoengine.configuration.INFRASTRUCTURE getInfrastructure()

Specified by:

getInfrastructure in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

Specified by:

getInfrastructure in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

init

public void init()
          throws Exception

Specified by:

init in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

Throws:

Exception

setConfiguration

public void setConfiguration(org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration config)

Specified by:

setConfiguration in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

shutdown

public void shutdown()

Specified by:

shutdown in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

getLoad

public String getLoad()

Specified by:

getLoad in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

getResourceLoad

public String getResourceLoad()

Specified by:

getResourceLoad in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent