org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators

Class BIONYM

java.lang.Object

org.n52.wps.server.AbstractDescriptorAlgorithm

org.n52.wps.server.AbstractAnnotatedAlgorithm

org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mapping.AbstractEcologicalEngineMapper

org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.BIONYM

All Implemented Interfaces:

IGenerator, org.n52.wps.server.IAlgorithm, org.n52.wps.server.observerpattern.ISubject

public class BIONYM
extends AbstractEcologicalEngineMapper
implements IGenerator

Nested Class Summary

Nested classes/interfaces inherited from class org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mapping.AbstractEcologicalEngineMapper

AbstractEcologicalEngineMapper.StatusUpdater

Nested classes/interfaces inherited from class org.n52.wps.server.AbstractAnnotatedAlgorithm

org.n52.wps.server.AbstractAnnotatedAlgorithm.Proxy

Field Summary

Fields inherited from class org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mapping.AbstractEcologicalEngineMapper

config, databaseParametersMemoryCache, endTime, infrastructureDialoguer, inputs, outputs, runningcomputations, startTime, times, wpsExternalID

Constructor Summary

Constructors

Constructor and Description
BIONYM()

Method Summary

Methods

Modifier and Type	Method and Description
org.apache.xmlbeans.XmlObject	getNon_deterministic_output()
org.n52.wps.io.data.GenericFileData	getOutputTable()
void	run()
void	setAccuracy_vs_Speed(String data)
void	setActivate_Preparsing_Processing(Boolean data)
void	setMatcher_1(String data)
void	setMatcher_2(String data)
void	setMatcher_3(String data)
void	setMatcher_4(String data)
void	setMatcher_5(String data)
void	setMaxResults_1(Integer data)
void	setMaxResults_2(Integer data)
void	setMaxResults_3(Integer data)
void	setMaxResults_4(Integer data)
void	setMaxResults_5(Integer data)
void	setOutputTableLabel(String data)
void	setParser_Name(String data)
void	setRawNamesColumn(String data)
void	setRawTaxaNamesTable(org.n52.wps.io.data.GenericFileData file)
void	setTaxa_Authority_File(String data)
void	setThreshold_1(Double data)
void	setThreshold_2(Double data)
void	setThreshold_3(Double data)
void	setThreshold_4(Double data)
void	setThreshold_5(Double data)
void	setUse_Stemmed_Genus_and_Species(Boolean data)

Methods inherited from class org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mapping.AbstractEcologicalEngineMapper

addComputation, addDatabaseInfo, deleteGeneratedFiles, deleteTemporaryTables, displayRunningComputations, getComputationalAgent, getDatabaseInfo, getInputParameters, getOutput, getRuningComputations, manageUserToken, removeComputation, setWpsExternalID, updateComputationOnWS, updateStatus, waitForResources

Methods inherited from class org.n52.wps.server.AbstractAnnotatedAlgorithm

createAlgorithmDescriptor, getAlgorithmClass, getAlgorithmInstance, run

Methods inherited from class org.n52.wps.server.AbstractDescriptorAlgorithm

addError, addObserver, getAlgorithmDescriptor, getDescription, getErrors, getInputDataType, getOutputDataType, getState, getWellKnownName, notifyObservers, processDescriptionIsValid, removeObserver, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BIONYM

public BIONYM()

Method Detail

setRawTaxaNamesTable

public void setRawTaxaNamesTable(org.n52.wps.io.data.GenericFileData file)

setRawNamesColumn

public void setRawNamesColumn(String data)

setOutputTableLabel

public void setOutputTableLabel(String data)

setTaxa_Authority_File

public void setTaxa_Authority_File(String data)

setParser_Name

public void setParser_Name(String data)

setActivate_Preparsing_Processing

public void setActivate_Preparsing_Processing(Boolean data)

setUse_Stemmed_Genus_and_Species

public void setUse_Stemmed_Genus_and_Species(Boolean data)

setAccuracy_vs_Speed

public void setAccuracy_vs_Speed(String data)

setMatcher_1

public void setMatcher_1(String data)

setThreshold_1

public void setThreshold_1(Double data)

setMaxResults_1

public void setMaxResults_1(Integer data)

setMatcher_2

public void setMatcher_2(String data)

setThreshold_2

public void setThreshold_2(Double data)

setMaxResults_2

public void setMaxResults_2(Integer data)

setMatcher_3

public void setMatcher_3(String data)

setThreshold_3

public void setThreshold_3(Double data)

setMaxResults_3

public void setMaxResults_3(Integer data)

setMatcher_4

public void setMatcher_4(String data)

setThreshold_4

public void setThreshold_4(Double data)

setMaxResults_4

public void setMaxResults_4(Integer data)

setMatcher_5

public void setMatcher_5(String data)

setThreshold_5

public void setThreshold_5(Double data)

setMaxResults_5

public void setMaxResults_5(Integer data)

getOutputTable

public org.n52.wps.io.data.GenericFileData getOutputTable()

getNon_deterministic_output

public org.apache.xmlbeans.XmlObject getNon_deterministic_output()

run

public void run()
         throws Exception

Overrides:

run in class AbstractEcologicalEngineMapper

Throws:

Exception